error: Inconsistent read size

medvedevgroup / TwoPaCo

A fast constructor of the compressed de Bruijn graph from many genomes

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error: Inconsistent read size #5

Closed ChriKub closed 7 years ago

ChriKub commented 7 years ago

Hi,

When running TwoPaCo with any dataset that consists of at least two sequences of different size (in one, or more files) I almost immediately get this error message:

Round 0, 0:1048576 Pass Filling Filtering 1 error: Inconsistent read size

Is this wanted behavior, that TwoPaCo can only deal with input sequences of the same size?

Thanks, Chris

iminkin commented 7 years ago

Did you check out the master branch?

ChriKub commented 7 years ago

Yes

ChriKub commented 7 years ago

Solved by updating and new install.