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meeg-ml-benchmarks / brain-age-benchmark-paper

M/EEG brain age benchmark paper
https://meeg-ml-benchmarks.github.io/brain-age-benchmark-paper/
BSD 3-Clause "New" or "Revised" License
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filterbank-riemann on TUAB cross_validate array shape error #56

Open anthonyromyn opened 2 years ago

anthonyromyn commented 2 years ago

Hey brain-age team,

Everything has been going great with TUAB analysis: dummy, shallow, and deep analyses have all run great with expected results. However, when running filterbank-riemann analysis I'm getting a cross_validate error ValueError: could not broadcast input array from shape (16,16) into shape (20,20) which results in 10 out of 10 fits failed.

Here's the full error code: Screenshot from 2022-04-26 16-22-13

Screenshot from 2022-04-26 16-22-20

Best, Anthony

Ammar-Elsaeed commented 1 year ago

Hi Anthony, unfortunatly, I don't have an answer to your question. on a side note, may I ask you what version did you use for mne-bids-pipeline to run the preprocessing and source steps ? the source steps are not working for me and I suspect it's an error due to different versions. thanks!

anthonyromyn commented 1 year ago

Hi Ammar,

Looking back at my code, I was using whichever version was the latest release at the time. For the source modelling problems, are you running these on google colab? The source modelling software doesn't work on colab as far as I am aware, so that could be why it's not working?

Best, Anthony

Ammar-Elsaeed commented 1 year ago

Thanks a lot anthony for your reply. I am not running them on google colab.