meghalithic / bryo_metadata

scripts and datafiles used to reconcile stegino metadata
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tasks #4

Closed meghalithic closed 2 weeks ago

meghalithic commented 1 year ago

from issue 11

meghalithic commented 1 year ago

random notes to self:

check: S,P,F in merged file standardize "v" in AV to be lowercase Fill in missing new file names Standardize specimen number to 4 numbers in specimenNR and file name standardize everything before ext is separated by "_" standardize all AV have 2 digits standardize all fileName to have BSE

add to protocol: Add lower case v to protocol Add 4 numbers, including leading 0s standardize everything before ext is separated by "_", including specimenNR standardize all AV have 2 digits standardize all fileName to have BSE

Make note of weird 99 _1_1

meghalithic commented 2 weeks ago

F means fragment of colony (i.e., unattached to a shell)