Replace ndarray to memoryview

mehrdadbakhtiari / adVNTR

A tool for genotyping Variable Number Tandem Repeats (VNTR) from sequence data

http://advntr.readthedocs.io/

BSD 3-Clause "New" or "Revised" License

39 stars 15 forks source link

Closed Jong-hun-Park closed 4 years ago

Jong-hun-Park commented 4 years ago

Replacing ndarray to memoryview gives ~10-fold speed-up on viterbi algorithm.