Read ID and the mapping status is stored for individual recruited reads in the log file. Mapping status is defined as whether a read was recruited from mapped reads or unmapped reads.
Other information such as the repeats and visited states were already logged. So this comes in as a complement of those information.
There is no specific flag to control the log for Illumina reads as there was none before. The way to stop these logs is by setting the log level or with the --disable_logging flag
Read ID and the mapping status is stored for individual recruited reads in the log file. Mapping status is defined as whether a read was recruited from mapped reads or unmapped reads.
Other information such as the repeats and visited states were already logged. So this comes in as a complement of those information.
There is no specific flag to control the log for Illumina reads as there was none before. The way to stop these logs is by setting the log level or with the
--disable_loggingflag