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mehta-lab / recOrder

3D quantitative label-free imaging with phase and polarization
BSD 3-Clause "New" or "Revised" License
11 stars 4 forks source link

Pycromanager T and Z sweep acquisition script #453

Closed talonchandler closed 8 months ago

talonchandler commented 8 months ago

cc @andy-sweet @ziw-liu

This simple script move the z stage at regular intervals. I've marked the point where acquire-python can write a frame to a zarr.

codecov[bot] commented 8 months ago

Codecov Report

Merging #453 (28b13b2) into v1-gui-layout (c76b8d0) will decrease coverage by 0.09%. The diff coverage is 0.00%.

@@               Coverage Diff                @@
##           v1-gui-layout    #453      +/-   ##
================================================
- Coverage           8.09%   8.00%   -0.09%     
================================================
  Files                 31      32       +1     
  Lines               4866    4920      +54     
================================================
  Hits                 394     394              
- Misses              4472    4526      +54
Files Coverage Δ
recOrder/plugin/_widget.py 0.00% <0.00%> (ø)
recOrder/scripts/acquire-z-stack.py 0.00% <0.00%> (ø)
recOrder/scripts/watch_zarr.py 0.00% <0.00%> (ø)
ziw-liu commented 8 months ago

@talonchandler can we merge this?