ATAC-seq data as input - Githubissues

meichendong / SCDC

SCDC

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ATAC-seq data as input #34

Open seoyeonoh12 opened 2 years ago

seoyeonoh12 commented 2 years ago

Dear,

I am interested in using SCDC as cell type deconvolution using ATAC-seq datasets. Can I use different input formats other than Expressionset? otherwise, how can I pre-process the data to be able to use it?

Thank you in advance.

Kind regards, Seoyeon