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mendessoares / MMinte

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pip install can't find cobra==0.5.11 #8

Open walain opened 7 years ago

walain commented 7 years ago

Installation of MMinte using pip as described fails due to not being able to find cobra=0.5.11. Not trying to install in qime box.

mendessoares commented 7 years ago

Try installing from the GitHub package and replacing cobra 0.5.11 for cobra 0.6 M. Helena Mendes Soares, Ph.D. Assistant Professor of Surgery, College of Medicine and Science Research Fellow, Microbiome Program, Center for Individualized Medicine Phone: 507-284-0123 Pager: 127 (07102)

Mayo Clinic 200 First Street SW Rochester, MN 55905 mayoclinic.orghttp://www.mayoclinic.org/

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Installation of MMinte using pip as described fails due to not being able to find cobra=0.5.11. Not trying to install in qime box.

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mmundy42 commented 7 years ago

There were some issues with the builds of the 0.5.11 release of cobra on various platforms. MMinte version 1.0.2 is now available that removes the dependency on cobra 0.5.11. MMinte now supports both cobra 0.5.11 and cobra 0.6.X.

Try installing MMinte 1.0.2 and if still have trouble post back here with details on the type of system you are using and the Python version.