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mengyao / Complete-Striped-Smith-Waterman-Library

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avx support #89

Open HatakeKakaxi opened 1 year ago

HatakeKakaxi commented 1 year ago

It's a great library! However, it seems to use SSE2, which is an old instruction set. Maybe using AVX2 or AVX512 is even faster?

jeffdaily commented 1 year ago

https://github.com/jeffdaily/parasail has AVX2, but not AVX512.