merenlab / anvio

An analysis and visualization platform for 'omics data
http://merenlab.org/software/anvio
GNU General Public License v3.0
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Newick rerooting #2220

Closed metehaansever closed 4 months ago

metehaansever commented 4 months ago

Finally I figure it out how to solve our Newick tree rerooting problem! I would be grateful if anyone test it. :) This is our test tree: ((C,D)1,(A,(B,X)3)2,E)R; This is expected rerooted tree: (X:0.5,(B:1,(A:1,((C:1,D:1)1:1,E:1)2:1)3:1):0.5);

This is the paper who desribe the problem: link