Add @treitlis as contributor

[ivagljiva]

Hey @treitlis,

Thanks for your contribution to the k-mer size documentation for anvi-gen-contigs-database (it will be updated on the website shortly).

I've started to add your info to our contributors file, but need your help to fill in the rest of the details. :) You can find a template with the information that we usually include in this workflow for adding contributors. Please update the CONTRIBUTORS.yaml file, and add a 900x900 pixel photo under the AVATARS directory, if possible.

Thanks!

[ivagljiva]

this is the updated documentation, btw: https://anvio.org/help/main/programs/anvi-gen-contigs-database/#changing-k-mer-size

feel free to suggest changes if needed :)

[treitlis]

To be honest with you, I have a suspicion that also the executable of sqlite3 might need to be replaced. So I would suggest to add this as well. I updated first the executable, then I realized that it is not enough, so I updated the library. But I never tested it without replacing the executable, so better save than sorry.

2. Copy the compiled executable to the conda bin directory, which would look something like this (paths are not exact and depend on your system/anvi’o installation): cp /path/to/new/library/libsqlite3.so.0.8.6 /home/user/miniconda3/envs/anvio-7.1/bin/sqlite3

[ivagljiva]

That first path looks like the same library path as before :) I assume it should actually be something like this? /path/to/new/library/sqlite3

[treitlis]

That first path looks like the same library path as before :) I assume it should actually be something like this? /path/to/new/library/sqlite3

You are right but in that case let's change both paths: Executable: /path/to/compiled/sqlite/sqlite3 Library: /path/to/compiled/sqlite/.libs/libsqlite3.so.0.8.6

[ivagljiva]

Done! Thanks for the quick response. I added your info and picture, and I updated the paths as suggested :)

[ivagljiva]

https://anvio.org/people/treitlis/ 🎉

[meren]

🎉