search

merenlab / anvio

An analysis and visualization platform for 'omics data
http://merenlab.org/software/anvio
GNU General Public License v3.0
413 stars 142 forks source link

Trouble installing anvi'o 8 on Apple M1 Pro #2272

Open lexikazen opened 1 month ago

lexikazen commented 1 month ago

Short description of the problem

Unable to get all of the steps to work properly when installing Anvi'o

anvi'o version

Anvi'o .......................................: marie (v8) Python .......................................: 3.10.14

Profile database .............................: 38 Contigs database .............................: 21 Pan database .................................: 16 Genome data storage ..........................: 7 Auxiliary data storage .......................: 2 Structure database ...........................: 2 Metabolic modules database ...................: 4 tRNA-seq database ............................: 2

anvi-self-test --version

System info

macOS M1 Pro; installed anvi'o using the stable version instructions

Detailed description of the issue

When running anvi-self-test or anvi-interactive, I get this error:

Config Error: There is something wrong :( There is not even a single SCG source found. Usually anvi'o comes with multiple of them :/

There were no error when installing Anvi'o itself or all the dependencies, so I'm not sure why it's giving this error. Any help would be appreciated!