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merenlab / anvio

An analysis and visualization platform for 'omics data
http://merenlab.org/software/anvio
GNU General Public License v3.0
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[BUG] anvi-setup-scgs-taxonomy STILL writes SCGs database to default location #2294

Closed xvazquezc closed 4 months ago

xvazquezc commented 4 months ago

Short description of the problem

Pretty much issue #2010 (closed), which was supposedly solved. anvi-setups-scgs-taxonomy writes to default location even with --scgs-taxonomy-data-dir.

I'm running the setup for a new installation (anvio-dev, both Ubuntu and Rocky Linux) and still have the issue of being saved to the default location, which I'm guessing as it doesn't write anything to the path indicated with --scgs-taxonomy-data-dir. No difference if the directory already exists or not.

Let me know if you need further details.

meren commented 4 months ago

:(

meren commented 4 months ago

It is now done. I promise. Triple checked.