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merenlab / anvio

An analysis and visualization platform for 'omics data
http://merenlab.org/software/anvio
GNU General Public License v3.0
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Support prodigal v2.6.3 #394

Closed fbreitwieser closed 8 years ago

fbreitwieser commented 8 years ago

Prodigal v2.6.3 is available, but currently not supported in anvio (v2.60 and v2.6.2 are).

anvi-gen-contigs-database seems to work fine with it, at least on one data set I was running with it (after duping the version number).

https://github.com/hyattpd/prodigal/releases/

meren commented 8 years ago

Thank you very much, Florian!

I will test it, and add it in the list of versions anvi'o is fine with immediately after ISME! :)

Best,

fbreitwieser commented 8 years ago

Thank you :)

meren commented 8 years ago

sorry for the late response. I finally could test it properly and do this little change.

meren commented 8 years ago

of course, it will be effective with the next stable release unless you are using the master repository :)