Closed jmeppley closed 7 years ago
Hi John,
I realized that a very short while ago and fixed the requirements.txt in the master
(https://github.com/merenlab/anvio/commit/d23bb1f584e6fc49787a074baa4bebd3e99244f7) :/
We clearly need to stick with explicit version numbers in the requirements just to make sure things will not fail in the long run. My mistake.
I know you don't need any help to resolve it, but I updated the installation manual, and I've been referencing people who complain about this error to this e-mail:
https://groups.google.com/forum/#!msg/anvio/56KI_ulAJr8/3xLpRk0qBAAJ
When py3 repo is merged to master the fix will be in affect. Sorry for the inconvenience, and thank you for the report.
My latest installs have been failing because pip is now up to cherrypy 10.0. The issue comes up when I launch anvi-interactive:
It seems that, as of cherrypy 9.0, the wsgiserver module in cherrpy has been relocated. Technically, this is probably a bug with the dependency definitions in bottle, but it might be worthwhile for anvio users to limit cherrypy to versions <9.
I see this problem both with the pip installed anvio (2.1.0) and the python3 version of anvio (the new-profiling branch). I don't have a working install from the master branch to test with, sorry.