merenlab / oligotyping

Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa
GNU General Public License v2.0
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rare oligotype elimination is not perfect.. #5

Closed meren closed 12 years ago

meren commented 12 years ago

oligotypes are being eliminated based on the minimum percent abundance in at least one dataset.

however, if the number of sequences is actually less than a hundred percent abundance doesn't make much sense.