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meringlab / FlashWeave.jl

Inference of microbial interaction networks from large-scale heterogeneous abundance data
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Failed to install FlashWeave #13

Closed Lin936 closed 4 years ago

Lin936 commented 4 years ago

I am just starting to learn Julia. I would like to use FlashWeave to analyze my data, but failed to install FlashWeave. The error is : Unable to automatically install " OpenSpecFun" from C:.julia\packages\OpenSpecFun_j11\G7uzt\Artifacts.tom1 How should I solve this error? Thanks for your help

jtackm commented 4 years ago

Hi, sorry to hear that. I've never encountered this error on any of our test systems, but googling your error message suggest's that it's a problem unrelated to FlashWeave. Perhaps your curl installation (used to download packages) could be problematic: https://discourse.julialang.org/t/cant-install-openspecfun-jll/33593 . You could follow the lead of the person asking there and talk to your sysadmin to fix this if that's possible.

You may also be hitting a BinaryBuilder.jl bug, so make sure you use the latest version of Julia (1.3.1, you see it by typing versioninfo()) and of BinaryBuilder: https://discourse.julialang.org/t/julia-v1-3-0-has-been-released/31549/19 https://github.com/JuliaPackaging/BinaryBuilder.jl/issues/527

In any case, you may consider asking directly in those places since people there have a better grasp on Julia internals, in particular package installation issues. If the problem turns out to be FlashWeave-specific, please let me know and I'll see how I can make it work on my end.

Lin936 commented 4 years ago

Thank you so much! I am trying to solve Julia problem.

jtackm commented 4 years ago

Closing this for now, we can re-open if the issue turns out to be particular to FlashWeave.