It is not possible to pip install this package using python 3.10 (Ubuntu 22.04 with conda).
There is an issue with numba, as you can see on the log below
error: Command "gcc -pthread -B /home/miniconda3/envs/vital_exploratory/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /home/miniconda3/envs/vital_exploratory/include -fPIC -O2 -isystem /home/miniconda3/envs/vital_exploratory/include -fPIC -I/home/miniconda3/envs/vital_exploratory/lib/python3.10/site-packages/numpy/core/include -I/home/miniconda3/envs/vital_exploratory/include/python3.10 -c numba/_dispatcher.c -o build/temp.linux-x86_64-cpython-310/numba/_dispatcher.o" failed with exit status 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for numba
Running setup.py clean for numba
Building wheel for llvmlite (setup.py) ... error
error: subprocess-exited-with-error
× python setup.py bdist_wheel did not run successfully.
│ exit code: 1
╰─> [15 lines of output]
running bdist_wheel
/home/miniconda3/envs/vital_exploratory/bin/python /tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py
LLVM version... 14.0.0
Traceback (most recent call last):
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 191, in <module>
main()
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 181, in main
main_posix('linux', '.so')
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 143, in main_posix
raise RuntimeError(msg)
RuntimeError: Building llvmlite requires LLVM 10.0.x or 9.0.x, got '14.0.0'. Be sure to set LLVM_CONFIG to the right executable path.
Read the documentation at http://llvmlite.pydata.org/ for more information about building llvmlite.
error: command '/home/miniconda3/envs/vital_exploratory/bin/python' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for llvmlite
Running setup.py clean for llvmlite
Failed to build numba llvmlite
Installing collected packages: llvmlite, lazy-loader, joblib, future, et-xmlfile, Cython, chardet, audioread, astunparse, tzlocal, soundfile, scikit-learn, pyflowchart, py-ecg-detectors, pooch, openpyxl, numba, nolds, mbstrdecoder, astropy, wfdb, typepy, statsmodels, pycwt, librosa, hrv-analysis, heartpy, dateparser, pmdarima, datetimerange, vital-sqi
Running setup.py install for llvmlite ... error
error: subprocess-exited-with-error
× Running setup.py install for llvmlite did not run successfully.
│ exit code: 1
╰─> [31 lines of output]
running install
/home/miniconda3/envs/vital_exploratory/lib/python3.10/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!
********************************************************************************
Please avoid running ``setup.py`` directly.
Instead, use pypa/build, pypa/installer, pypa/build or
other standards-based tools.
See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
********************************************************************************
!!
self.initialize_options()
running build
got version from file /tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/llvmlite/_version.py {'version': '0.34.0', 'full': 'c5889c9e98c6b19d5d85ebdd982d64a03931f8e2'}
running build_ext
/home/miniconda3/envs/vital_exploratory/bin/python /tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py
LLVM version... 14.0.0
Traceback (most recent call last):
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 191, in <module>
main()
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 181, in main
main_posix('linux', '.so')
File "/tmp/pip-install-h8sz9tgi/llvmlite_913a0b1a0397448cbb8db46c559ed13d/ffi/build.py", line 143, in main_posix
raise RuntimeError(msg)
RuntimeError: Building llvmlite requires LLVM 10.0.x or 9.0.x, got '14.0.0'. Be sure to set LLVM_CONFIG to the right executable path.
Read the documentation at http://llvmlite.pydata.org/ for more information about building llvmlite.
error: command '/home/miniconda3/envs/vital_exploratory/bin/python' failed with exit code 1
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure
× Encountered error while trying to install package.
╰─> llvmlite
note: This is an issue with the package mentioned above, not pip.
hint: See above for output from the failure.
It is not possible to pip install this package using python 3.10 (Ubuntu 22.04 with conda).
There is an issue with numba, as you can see on the log below