Update to the version 3.5 or 3.5.1 R

chxp commented 5 years ago

I cannot find the MetaDE in R version 3.5.1, however the MetaQC/MetaPath is OK.

So may you update the package when you are free?

matianzhou commented 5 years ago

Hi,

Did you install from CRAN or github ? Installing from github should be no problem, the package on CRAN is still the old one and we will update it soon. Thanks.

Best, Charles

On Tue, Sep 4, 2018 at 10:28 PM chenxp notifications@github.com wrote:

I cannot find the MetaDE in R version 3.5.1, however the MetaQC/MetaPath is OK.

So may you update the package when you are free?

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/metaOmics/MetaDE/issues/13, or mute the thread https://github.com/notifications/unsubscribe-auth/APO6RDOCuV7yNIajDZCq3Iv0EYfVi_6Lks5uXza1gaJpZM4WaEwx .

-- Tianzhou (Charles) Ma, PhD Assistant Professor Department of Epidemiology and Biostatistics University of Maryland School of Public Health 2234M SPH Building #255 4200 Valley Drive College Park, MD 20742 Tel: 301-405-6421 Email: tma0929@umd.edu

chxp commented 5 years ago

I tried to install from github, however it shows:

> install_github('metaOmics/MetaDE')
Downloading GitHub repo metaOmics/MetaDE@master
from URL https://api.github.com/repos/metaOmics/MetaDE/zipball/master
Installing MetaDE
'/usr/lib64/R/bin/R' --no-site-file --no-environ --no-save --no-restore  \
  --quiet CMD INSTALL  \
  '/tmp/Rtmp6kjlnc/devtools72b799b0f7e/metaOmics-MetaDE-7a45463'  \
  --library='/home/chxp/R/x86_64-pc-linux-gnu-library/3.5' --install-tests 

ERROR: dependency ‘samr’ is not available for package ‘MetaDE’
* removing ‘/home/chxp/R/x86_64-pc-linux-gnu-library/3.5/MetaDE’
Installation failed: Command failed (1)

It seems the library samr is not available in R3.5.

metaOmics / MetaDE

Update to the version 3.5 or 3.5.1 R #13