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metaOmics / metaOmics

Shiny GUI application for genomics meta-analysis
Apache License 2.0
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Warning: Error in get: object '%AND%' not found #65

Open ManarRashad opened 2 years ago

ManarRashad commented 2 years ago

How to solve this error while running shiny::runApp('metaOmics-master', port=9987, launch.browser=T)

Listening on http://127.0.0.1:9987 Warning: Error in get: object '%AND%' not found 99: get 98: ::: 93: directoryInput [global/directoryInput.R#73] 84: setting_ui [ui/setting_ui.R#4] Warning: Error in get: object '%AND%' not found 99: get 98: ::: 93: directoryInput [global/directoryInput.R#73] 84: setting_ui [ui/setting_ui.R#4]

matianzhou commented 1 year ago

This is likely something to do with the new R version that can no longer read the operator in old versions of R like "%AND%", you may give a try if you use old versions such as R 3.3 or R3.4 ?

Tianzhou (Charles) Ma, PhD Assistant Professor Department of Epidemiology and Biostatistics University of Maryland School of Public Health Atlantic Bldg. ATL (#224), Room 1433 4254 Stadium Dr. College Park, MD 20742 Tel: 301-405-6421 Email: @.*** Website: (Department) https://sph.umd.edu/people/tianzhou-ma (Personal) https://matianzhou.github.io/

On Fri, May 20, 2022 at 10:36 PM ManarRashad @.***> wrote:

How to solve this error while running shiny::runApp('metaOmics-master', port=9987, launch.browser=T)

Listening on http://127.0.0.1:9987 Warning: Error in get: object '%AND%' not found 99: get 98: ::: 93: directoryInput [global/directoryInput.R#73] 84: setting_ui [ui/setting_ui.R#4] Warning: Error in get: object '%AND%' not found 99: get 98: ::: 93: directoryInput [global/directoryInput.R#73] 84: setting_ui [ui/setting_ui.R#4]

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vanessamaso commented 1 year ago

I tried to use the R version 3.3, but it is very difficult, because all packages are very old and several errors happens in their installation.

I would appreciate if there is any other solution rather than use old R version, since it is also complicated and time consuming. I would really like to use this package for my analysis, the package seems to be interesting, but I passed six hours tryng just to install and could not. I had several other issues that I could solve (I am installing on R v. 4.1.1) but I am struggling for hours with this '%AND%' not found error.

Could you help me, please? How can I solve this '%AND%' issue?

linne98 commented 2 months ago

the only available way to launch is through docker now while docker and wsl already crashed like 4 times till now