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metageni / SUPER-FOCUS

A tool for agile functional analysis of shotgun metagenomic data
GNU General Public License v3.0
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Description on functional profiles #56

Closed bishav6708 closed 4 years ago

bishav6708 commented 4 years ago

What is the difference between the 'Phages, Prophages, Transposable elements' and 'Phages, Prophages, Transposable elements, Plasmids'. How are 'Phages, Prophages, Transposable elements' incorporated in the later one? Does this indicate anything for the horizontal gene transfer? Can you refer to any literature for some detail description of each function?

metageni commented 4 years ago

Hi @bishav6708 I think this is a question to the SEED team. I'm sorry for not having an answer.