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metageni / SUPER-FOCUS

A tool for agile functional analysis of shotgun metagenomic data
GNU General Public License v3.0
21 stars 12 forks source link

diamond v2.0.xx #82

Closed bcpd closed 1 year ago

bcpd commented 1 year ago

Hello all - I wanted to make super-focus is compatible with diamond v2, as the the following link (https://github.com/bbuchfink/diamond/wiki/5.-Advanced-topics#database-format-versions) seems to suggest it is. Thanks very much.

metageni-twist commented 1 year ago

i have never tried it. Any thoughts? @linsalrob

linsalrob commented 1 year ago

There are diamond version 2 databases already available: https://cloudstor.aarnet.edu.au/plus/s/ABAbFgoUow9Swpi

Rob

On Fri, 28 Oct 2022 at 10:14, Genivaldo Silva @.***> wrote:

i have never tried it. Any thoughts? @linsalrob https://github.com/linsalrob

— Reply to this email directly, view it on GitHub https://github.com/metageni/SUPER-FOCUS/issues/82#issuecomment-1294238679, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAGMFB7QD7BJ26EWB3W3J2TWFMHVBANCNFSM6AAAAAARQRK23E . You are receiving this because you were mentioned.Message ID: @.***>

bcpd commented 1 year ago

Great -- thank you for your reply. I will close the issue for now.