Key error with DADA2 - Githubissues

metagenlab / zAMP

zAMP is a bioinformatic pipeline designed for convenient, reproducible and scalable amplicon-based metagenomics

https://zamp.readthedocs.io/en/latest/

MIT License

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Key error with DADA2 #39

Closed valscherz closed 3 months ago

valscherz commented 3 months ago

Random error, probably due to special as "-" characters in "sample_label"

InputFunctionException in line 110 of /home/valentinscherz/bin/microbiome16S_pipeline/rules/1_2_DADA2_ASVs/2_DADA2_denoising.rules:
Error:
  KeyError: 'MN-MOCK-20180809'
Wildcards:
  RUN=runa549
  sample=MN-MOCK-20180809