Closed vicasze closed 2 months ago
PR for version 0.10.0
Updates to in-silico module: tested with NCBI fungi complete genomes Added support for fungi ITS in the preprocessing and in-silico modules.
Additions
dicey module for amplicon extraction. Support for fungi ITS amplicon extraction (preprocessing and in-silico modules)
Changes
in-silico runs with dicey instead of simulatePCR
Fixes
Some fixes to R code
PR for version 0.10.0
Summary
Updates to in-silico module: tested with NCBI fungi complete genomes Added support for fungi ITS in the preprocessing and in-silico modules.
Details
Additionsdicey module for amplicon extraction. Support for fungi ITS amplicon extraction (preprocessing and in-silico modules)
Changesin-silico runs with dicey instead of simulatePCR
FixesSome fixes to R code