Error in rule DRAM_destill

[x] I checked and didn't found a related issue,e.g. while typing the title
[x] I got an error in the following rule(s):

[x] I checked the log files indicated indicated in the error message (and the cluster logs if submitted to a cluster)

Here is the relevant log output:

2023-05-13 04:33:00,495 - The log file is created at genomes/annotations/dram/distil/distill.log
2023-05-13 04:33:00,562 - Note: the fallowing id fields were not in the annotations file and are not being used: ['kegg_genes_id', 'ko_id', 'kegg_id', 'kegg_hit', 'peptidase_family', 'cazy_best_hit', 'pfam_hits', 'camper_id', 'fegenie_id', 'sulfur_id', 'methyl_id'], but these are []
/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/mag_annotator/database_handler.py:166: UserWarning: Database does not exist at path None
  warnings.warn(
/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/mag_annotator/database_handler.py:123: UserWarning: Database does not exist at path None
  warnings.warn("Database does not exist at path %s" % description_loc)
Traceback (most recent call last):
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/bin/DRAM.py", line 207, in <module>
    args.func(**args_dict)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/mag_annotator/summarize_genomes.py", line 657, in summarize_genomes
    genome_summary_form = pd.read_csv(database_handler.config["dram_sheets"]['genome_summary_form'], sep='\t')
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/util/_decorators.py", line 211, in wrapper
    return func(*args, **kwargs)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/util/_decorators.py", line 331, in wrapper
    return func(*args, **kwargs)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 950, in read_csv
    return _read(filepath_or_buffer, kwds)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 605, in _read
    parser = TextFileReader(filepath_or_buffer, **kwds)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 1442, in __init__
    self._engine = self._make_engine(f, self.engine)
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/parsers/readers.py", line 1735, in _make_engine
    self.handles = get_handle(
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/common.py", line 713, in get_handle
    ioargs = _get_filepath_or_buffer(
  File "/projects/com_perkinsd/common/databases/conda_envs/a779e7ab5b5ee88b6a071a9705d2d44a_/lib/python3.10/site-packages/pandas/io/common.py", line 451, in _get_filepath_or_buffer
    raise ValueError(msg)
ValueError: Invalid file path or buffer object type: <class 'NoneType'>

Atlas version 2.16.1 Additional context Add any other context about the problem here.

metagenome-atlas / atlas

Error in rule DRAM_destill #654