If only one binner manages to produce bins then MAGScoT assumes that only scoring should be done and no *refined.contig_to_bin.out file is created. In these cases we directly take the output of the binner.
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Please check if anything in the Readme must be adjusted, or added (development-setup, production-setup, user-guide).
PRs with new modules or workflow interfaces must include tests according to the developer guidelines.
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If only one binner manages to produce bins then MAGScoT assumes that only scoring should be done and no *refined.contig_to_bin.out file is created. In these cases we directly take the output of the binner.
Please provide a description for this PR
Description goes here...
PR review guidelines
Thank you for submitting this PR.
Before merge:
The PR must be reviewed by one of the team members.
Please check if anything in the Readme must be adjusted, or added (development-setup, production-setup, user-guide).
PRs with new modules or workflow interfaces must include tests according to the developer guidelines.
The new code is readable, well commented and should adhere to our developer guidelines.
Before merging it must be checked if a squash of commits is required.