metagenomics / metagenomics-tk

GNU Affero General Public License v3.0
0 stars 0 forks source link

Prokka Partial Genes #356

Open pbelmann opened 6 months ago

pbelmann commented 6 months ago

Prodigal usually marks partial genes with "partial" in a gff file. Prokka however does not add this tag. The only way to figure out if a gene is a partial gene or not is to parse the *.tbl files. Since this is quite difficult, we need a better solution. If it is too difficult to add this information to the gff, it would also be fine to add a separate tsv file or expand the existing tsv file with this information.