allow for gzip'ed input

metagentools / GraphBin2

☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

https://graphbin2.readthedocs.io/en/latest/

BSD 3-Clause "New" or "Revised" License

33 stars 3 forks source link

allow for gzip'ed input #5

Open nick-youngblut opened 3 years ago

nick-youngblut commented 3 years ago

It would be helpful if graphbin2 allowed for gzip'ed (and bz2 compressed) input, especially given the file sizes generated by metaspades (no minimum length cutoff, so all contigs included)