About HMM

[Andyargueasae]

Hello Vijini,

This is Yuhao Tong, from the University of Melbourne. I have sent an email reporting the problem of the hmm profile problem. Perhaps because of the .hmmout file problem, the new release has a small problem using hmmsearch: the .hmmout's absence in the directory may cause hmmsearch to fail in having conflicts in the profile: scanning nucleotide sequences while using amino acid HMM. So I wonder if there are any ways to use to fix this issue.

Cheers

[Vini2]

Hello @Andyargueasae,

Thanks for posting this. Can you please post it under MetaCoAG Issues? Pull requests are only opened when you have contributed to the code and you want to merge the new code changes with the main project repository. I will close this pull request.

[Andyargueasae]

Understood

Vijini Mallawaarachchi @.***>于2023年6月12日 周一15:45写道：

Hello @Andyargueasae https://github.com/Andyargueasae,

Thanks for posting this. Can you please post it under MetaCoAG Issues https://github.com/metagentools/MetaCoAG/issues? Pull requests are only opened when you have contributed to the code and you want to merge the new code changes with the main project repository. I will close this pull request.

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