metamaden / recountmethylation

Utilities to access and analyze harmonized databases of public DNAm arrays from GEO.
https://recount.bio/data/
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Cross platform functionality #20

Closed metamaden closed 3 years ago

metamaden commented 3 years ago

Adds support for EPIC/HM850K alongside HM450K datasets. Enables download of v.0.0.2 database files from the server. Updates getdb functions with "platform" argument. Adds smfilt function to filter servermatrix files. Updates ExperimentHub metadata.csv and script with new files. Fixes typos, format, citations, in User's Guide and adds troubleshooting section.