metaspace2020 / sm-engine

Engine for metabolite annotation for imaging mass spectrometry
Apache License 2.0
7 stars 5 forks source link

Add environment.yml file to sm-engine #30

Closed LachlanStuart closed 6 years ago

LachlanStuart commented 6 years ago

Having this file in the repository makes it a lot easier to set up the conda environment. Compared to the copy in sm-engine-ansible I have added pyspark

One issue I wasn't able to find an elegant solution for is this project's dependence on also being installed into the environment. The only clean way I found to do that was with the command pip install -e .