metrumresearchgroup / mrgsolve

Simulate from ODE-based population PK/PD and QSP models in R
https://mrgsolve.org
GNU General Public License v2.0
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Adopt _PACKAGE sentinel for package documentation #1136

Closed kylebaron closed 1 year ago

kylebaron commented 1 year ago

This PR adopts the "_PACKAGE" approach. See https://github.com/r-lib/roxygen2/issues/1491

Dear maintainer,

You have file 'mrgsolve/man/mrgsolve_package.Rd' with \docType{package}, likely intended as a package overview help file, but without the appropriate PKGNAME-package \alias as per "Documenting packages" in R-exts.

This seems to be the consequence of the breaking change

Using @docType package no longer automatically adds a -package alias. Instead document _PACKAGE to get all the defaults for package documentation.

in roxygen2 7.0.0 (2019-11-12) having gone unnoticed, see https://github.com/r-lib/roxygen2/issues/1491.

As explained in the issue, to get the desired PKGNAME-package \alias back, you should either change to the new approach and document the new special sentinel

"_PACKAGE"

or manually add

@aliases mrgsolve-package

if remaining with the old approach.

Please fix in your master sources as appropriate, and submit a fixed version of your package within the next few months.

kylebaron commented 1 year ago

Thanks, @kyleam