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meuleman / epilogos

Methods for summarizing and visualizing multi-biosample functional genomic annotations
https://epilogos.net
GNU General Public License v3.0
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Uncertain what the use of `sleep` here is for #25

Closed alexpreynolds closed 3 years ago

alexpreynolds commented 3 years ago

https://github.com/meuleman/epilogos/blob/80bf1f5b0846b495d40eda0cd0315c8c0d371b2c/src/computeEpilogosSlurm.py#L463-L466

Is there a reason you use sleep here, and different time values? (Is it to delay submission of separate jobs to the cluster?)

jacobquon commented 3 years ago

Yeah, the sleep is just so that the I'm not spamming the cluster with "sacct --format=JobID%18,JobName%50,State%10 --jobs" commands when I'm checking whether or not they're finished. I'll add a comment though. [devel f900832]