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mevers / NCI_ChIP-seq

Systematic optimization of parameters for ChIP-Seq peak calling algorithms using simulated short-read sequencing data
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Add building of bowtie2 index from any available FASTA files #5

Closed skurscheid closed 7 years ago

skurscheid commented 7 years ago

This adds two more rules:

  1. decompressing of downloaded *.fa.gz
  2. building of bt2 index of *.fa

Workflow seems to be functional but might require some testing.

mevers commented 7 years ago

Changes have been merged and all conflicts should be resolved.