Add checks in cleanData that can distinguish between miss-sepcified filters and non-failing samples 7432b1ee; addresses issue #31
Add checks and tests in check_snp_missingness, check_maf and check_hwe
in cases where all samples pass perIndividualQC.
31ed6f65; related to issue #31
Add checks and tests in evaluate_check_sex and evaluate_check_het_imiss
for all passing samples and accordingly, no fail samples label in plot.
d071a43
Update dropbox links and add note to vignette 9bae988
major changes
run_check_relatednessnot just fail IBD estimates d009da90minor changes
cleanDatathat can distinguish between miss-sepcified filters and non-failing samples 7432b1ee; addresses issue #31check_snp_missingness,check_mafandcheck_hwein cases where all samples passperIndividualQC. 31ed6f65; related to issue #31evaluate_check_sexandevaluate_check_het_imissfor all passing samples and accordingly, no fail samples label in plot. d071a43