We should start to create roughly one notebook for each potential figure. These notebooks should run everything exactly how we would want it in a paper. Where to start with this could be something along the lines of your poster:
Figure / notebook 1:
Raw phenotype data
Raw data / clustergram
We'll want to show how well replicates match up somehow...
Figure / notebook 2:
GridSearch with CV strategies 1 and 2.
Model predicted vs actual for best hyperparameter set
We should start to create roughly one notebook for each potential figure. These notebooks should run everything exactly how we would want it in a paper. Where to start with this could be something along the lines of your poster:
Figure / notebook 1:
Figure / notebook 2:
Let me know what you think.