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meyer-lab / DDMC

Clusters phosphoproteomics data based on a combination of the sequence information and abundance changes over conditions.
https://asmlab.org
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AXL regression #488

Closed mcreixell closed 3 years ago

mcreixell commented 3 years ago

@aarmey this is the regression against AXL RNA and protein expression together (first plot using MultiTaskLassoCV) or RNA only (second plot using LassoCV). Maybe I would've expected clusters 11, 19, and 23 to predict AXL expression levels as they seemed to highly correlate with them?

CV Prediction Score: 0.578 Multi

CV Prediction Score: 0.613 Mono

rna_corr

protein_corr

codecov[bot] commented 3 years ago

Codecov Report

Merging #488 (5f7d321) into master (b31a628) will not change coverage. The diff coverage is n/a.

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@@           Coverage Diff           @@
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  Coverage   44.42%   44.42%           
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  Files          18       18           
  Lines        1472     1472           
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  Hits          654      654           
  Misses        818      818
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