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meyer-lab / DDMC

Clusters phosphoproteomics data based on a combination of the sequence information and abundance changes over conditions.
https://asmlab.org
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New missingness approach #502

Closed aarmey closed 3 years ago

aarmey commented 3 years ago

@mcreixell please put your new version of ComputeModelError() here.

codecov[bot] commented 3 years ago

Codecov Report

Merging #502 (cc292c7) into sklearn-gmm (53890ff) will decrease coverage by 2.85%. The diff coverage is 100.00%.

:exclamation: Current head cc292c7 differs from pull request most recent head e560c67. Consider uploading reports for the commit e560c67 to get more accurate results Impacted file tree graph

@@               Coverage Diff               @@
##           sklearn-gmm     #502      +/-   ##
===============================================
- Coverage        40.70%   37.85%   -2.86%     
===============================================
  Files               17       16       -1     
  Lines             1410     1342      -68     
===============================================
- Hits               574      508      -66     
+ Misses             836      834       -2
Flag Coverage Δ
unittests 37.85% <100.00%> (-2.86%) :arrow_down:

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Impacted Files Coverage Δ
msresist/clustering.py 39.88% <100.00%> (-0.36%) :arrow_down:

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mcreixell commented 3 years ago

Updated ComputeModelError. Think this should do the job.

aarmey commented 3 years ago

Thanks.