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meyer-lab / FcRegression.jl

Study Fc antibody dynamics using a multivalent binding model
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Fitting murine binding with ADVI #485

Closed cyrillustan closed 2 years ago

cyrillustan commented 2 years ago

Hi @aarmey, this is the branch for ADVI fit. All functioning code should be under murineFit.jl. The master code to run ADVI is under runMurineMCMC().

codecov[bot] commented 2 years ago

Codecov Report

Merging #485 (aa32bba) into master (7858510) will increase coverage by 5.33%. The diff coverage is 7.69%.

@@            Coverage Diff             @@
##           master     #485      +/-   ##
==========================================
+ Coverage   18.00%   23.34%   +5.33%     
==========================================
  Files          28       28              
  Lines        1477     1495      +18     
==========================================
+ Hits          266      349      +83     
+ Misses       1211     1146      -65
Impacted Files Coverage Δ
src/figures/figure2b.jl 0.00% <0.00%> (ø)
src/figures/figure3.jl 0.00% <0.00%> (ø)
src/murineFit.jl 40.44% <10.34%> (+40.44%) :arrow_up:
src/mcmc.jl 22.72% <50.00%> (-0.35%) :arrow_down:
src/mixture.jl 37.16% <0.00%> (+0.88%) :arrow_up:
src/figures/figureCommon.jl 4.25% <0.00%> (+4.25%) :arrow_up:
src/figures/figure2.jl 17.64% <0.00%> (+17.64%) :arrow_up:

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