search

meyer-lab / tHMM

A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
https://asmlab.org
MIT License
10 stars 1 forks source link

cross validation on experimental data #949

Closed Farnazmdi closed 2 years ago

Farnazmdi commented 2 years ago

two runs for experimental data: image image Maybe lapatinib 4 and gemcitabine 5? I had hoped it would plateau in smaller states..

codecov[bot] commented 2 years ago

Codecov Report

Merging #949 (bf78e44) into master (0c5fa77) will increase coverage by 0.00%. The diff coverage is 100.00%.

@@           Coverage Diff           @@
##           master     #949   +/-   ##
=======================================
  Coverage   82.71%   82.72%           
=======================================
  Files          28       28           
  Lines        2239     2240    +1     
=======================================
+ Hits         1852     1853    +1     
  Misses        387      387
Flag Coverage Δ
unittests 82.72% <100.00%> (+<0.01%) :arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
lineage/states/StateDistributionGamma.py 95.13% <100.00%> (+0.03%) :arrow_up:

:mega: Codecov can now indicate which changes are the most critical in Pull Requests. Learn more