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meyer-lab / tHMM

A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
https://asmlab.org
MIT License
9 stars 1 forks source link

Faster fitting through SLSQP #959

Closed aarmey closed 2 years ago

aarmey commented 2 years ago

@Farnazmdi this should provide another massive fitting speedup because SLSQP is written in Fortran. I'll merge right now into your CV branch.