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meyer-lab / tHMM

A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
https://asmlab.org
MIT License
10 stars 1 forks source link

Simplify import code #963

Closed aarmey closed 1 year ago

codecov[bot] commented 2 years ago

Codecov Report

Merging #963 (94016c8) into master (1a407c1) will increase coverage by 0.03%. The diff coverage is 100.00%.

:exclamation: Current head 94016c8 differs from pull request most recent head a2c33cc. Consider uploading reports for the commit a2c33cc to get more accurate results

@@            Coverage Diff             @@
##           master     #963      +/-   ##
==========================================
+ Coverage   74.74%   74.77%   +0.03%     
==========================================
  Files          26       26              
  Lines        2138     2149      +11     
==========================================
+ Hits         1598     1607       +9     
- Misses        540      542       +2
Flag Coverage Δ
unittests 74.77% <100.00%> (+0.03%) :arrow_up:

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Impacted Files Coverage Δ
lineage/tests/test_import_lineage.py 100.00% <ø> (ø)
lineage/LineageTree.py 100.00% <100.00%> (ø)
lineage/import_lineage.py 96.99% <100.00%> (-0.81%) :arrow_down:
lineage/states/StateDistributionGaPhs.py 96.33% <100.00%> (ø)
lineage/states/StateDistributionGamma.py 95.13% <100.00%> (ø)
lineage/states/stateCommon.py 80.00% <0.00%> (-20.00%) :arrow_down:
lineage/CellVar.py 98.79% <0.00%> (-1.21%) :arrow_down:
lineage/BaumWelch.py 88.63% <0.00%> (-0.62%) :arrow_down:
lineage/LineageInputOutput.py 74.00% <0.00%> (-0.18%) :arrow_down:
... and 10 more

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