mgalardini / pyseer

SEER, reimplemented in python 🐍🔮
http://pyseer.readthedocs.io
Apache License 2.0
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Problem installing pyseer with conda #232

Closed ireneortega closed 1 year ago

ireneortega commented 1 year ago

I create a new environment I run: conda install -c bioconda pyseer The package is not installed after these messages appear:

(pyseer_env) $ conda install -c bioconda pyseer
Collecting package metadata (current_repodata.json): done
Solving environment: failed with initial frozen solve. Retrying with flexible solve.
Solving environment: failed with repodata from current_repodata.json, will retry with next repodata source.
Collecting package metadata (repodata.json): done
Solving environment: -

I tried with conda install pyseer I got the same. With pip after downloading the repository I got other errors which I can't solve. How can I install with conda?

mgalardini commented 1 year ago

So, the first method has not thrown an error, have you tried waiting for it to finish?

ireneortega commented 1 year ago

Yes, it shows me (pyseer_env) $ again to run a new command. I tried with different computers and I always get the same.

mgalardini commented 1 year ago

Are you sure you are not getting any other message other than what you reported? Also, if you have bioconda in your channels already it's much faster not to specify it, so doing something like conda create -n pyseer pysser should be faster

johnlees commented 1 year ago

Two other tips: