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mgijax / mammalian-phenotype-ontology

Standard terms for annotating mammalian phenotypic data
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new behavior terms #1194

Open obophenotype-user opened 11 years ago

obophenotype-user commented 11 years ago

Consider adding new terms under social investigation and sexual interaction.

Reported by: sbello

Original Ticket: obo/mammalian-phenotype-requests/1194

obophenotype-user commented 11 years ago

also social novelty terms

Original comment by: sbello

obophenotype-user commented 11 years ago

Original comment by: sbello

obophenotype-user commented 11 years ago

I went a bit far down the rabbit hole with this so I've changes the tracker item name. I've attached a file with the proposed changes.

Original comment by: sbello

obophenotype-user commented 11 years ago

Original comment by: sbello

obophenotype-user commented 11 years ago

see J:183290 for an example of olfaction related behavior - fine olfactory discrimination and olfactory sensitivity; assay involves "olfactory conditioning paradigm"

Original comment by: sbello

sbello commented 2 years ago

MP Behavior terms.docx Attaching doc from sourceforge ticket

sbello commented 2 years ago

obsoleting existing term for huddling behavior which was written to apply to mouse sleeping behavior only, replacing with a more general huddling behavior term to apply to any mammal Need to move annotations to this new term for: MGI:2175046 MGI:2654530 MGI:6201594 MGI:5750066

There are issues with the existing abnormal social/conspecific interaction term

  1. The definition as written "deviation of the normal behavior of animals towards each other" applies to interactions of an individual with any other animal, does not specify conspecific or that the animals are in the same group. This is broader than it should be
  2. The eq uses NBO social behavior which is defined as animals in the same group but does not specify same species. Social could be in a multispecies group so this is correct in the NBO but means that the eq misses the conspecific part of the term label

I've added a new term for heterospecifc interactions and this is currently a sibling to social/conspecific which seems fine since these interactions may be between any members of different species regardless of a shared group

Changed labels for aggression towards males aggression towards females terms to reflect that these are specifically for mouse-mouse interactions

Added a new conspecific aggression term and made this a parent for the mouse specific terms

Aggression towards humans does not indicate if this is heterospecific or conspecific. Currently this lives under aggression related behavior. I did not make it a child of either conspecific or heterospecific as it could be either. We should consider if having a heterospecific aggression towards humans term would be useful. Need to check with a behavior expert.