mgijax / mammalian-phenotype-ontology

Standard terms for annotating mammalian phenotypic data
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new terms: abnormal beta-glucuronidase activity (and children) #1632

Closed obophenotype-user closed 9 years ago

obophenotype-user commented 10 years ago

Proposed new hierarchy MP:0005584 abnormal enzyme/ coenzyme activity -i- MP:NEW abnormal beta-glucuronidase activity --i-- MP:NEW abnormal spermatazoal beta-glucuronidase activity --i-- MP:NEW decreased beta-glucuronidase activity ---i--- MP:NEW decreased spermatazoal beta-glucuronidase activity --i-- MP:NEW increased beta-glucuronidase activity ---i--- MP:NEW increased spermatazoal beta-glucuronidase activity

defs: abnormal beta-glucuronidase activity def: anomaly in the ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. Source: http://enzyme.expasy.org/EC/3.2.1.31

abnormal spermatazoal beta-glucuronidase activity def: anomaly in the ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa

decreased beta-glucuronidase activity def: reduced ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. Source: http://enzyme.expasy.org/EC/3.2.1.31

decreased spermatazoal beta-glucuronidase activity def: reduced ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa Source: http://enzyme.expasy.org/EC/3.2.1.31

increased beta-glucuronidase activity def: greater ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. Source: http://enzyme.expasy.org/EC/3.2.1.31

increased spermatazoal beta-glucuronidase activity def: greater ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa Source: http://enzyme.expasy.org/EC/3.2.1.31

Reported by: nicolevasilevsky

Original Ticket: obo/mammalian-phenotype-requests/1632

obophenotype-user commented 10 years ago

Diff:


--- old
+++ new
@@ -1,18 +1,32 @@
 Proposed new hierarchy
 MP:0005584 abnormal enzyme/ coenzyme activity
--i- abnormal beta-glucuronidase activity
+-i- MP:NEW abnormal beta-glucuronidase activity
+--i-- MP:NEW abnormal spermatazoal beta-glucuronidase activity
 --i-- MP:NEW decreased beta-glucuronidase activity
+---i--- MP:NEW decreased spermatazoal beta-glucuronidase activity
 --i-- MP:NEW increased beta-glucuronidase activity
+---i--- MP:NEW increased spermatazoal beta-glucuronidase activity

 defs:
 abnormal beta-glucuronidase activity
 def: anomaly in the ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. 
 Source: http://enzyme.expasy.org/EC/3.2.1.31

+abnormal spermatazoal beta-glucuronidase activity
+def: anomaly in the ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa 
+
 decreased beta-glucuronidase activity
-def: decreased ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. 
+def: reduced ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. 
+Source: http://enzyme.expasy.org/EC/3.2.1.31
+
+decreased spermatazoal beta-glucuronidase activity
+def: reduced ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa 
 Source: http://enzyme.expasy.org/EC/3.2.1.31

 increased beta-glucuronidase activity
-def: increased ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. 
+def: greater ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate. 
 Source: http://enzyme.expasy.org/EC/3.2.1.31
+
+increased spermatazoal beta-glucuronidase activity
+def: greater ability to catalyze the reaction: a beta-D-glucuronoside + H2O = an alcohol + D-glucuronate in the spermatozoa 
+Source: http://enzyme.expasy.org/EC/3.2.1.31

Original comment by: nicolevasilevsky

obophenotype-user commented 10 years ago

Added terms: MP:0020054 abnormal beta-glucuronidase activity MP:0020055 abnormal spermatazoal beta-glucuronidase activity MP:0020056 decreased beta-glucuronidase activity MP:0020057 decreased spermatazoal beta-glucuronidase activity MP:0020058 increased beta-glucuronidase activity MP:0020059 increased spermatazoal beta-glucuronidase activity

Original comment by: nicolevasilevsky

obophenotype-user commented 10 years ago

Original comment by: nicolevasilevsky