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mgymrek / pybamview

Browser based application for viewing bam alignments
MIT License
56 stars 17 forks source link

Add support for annotating simple variants from an input VCF file #11

Open mgymrek opened 10 years ago

mgymrek commented 10 years ago

This is a longer term enhancement. I welcome discussion from others on this possible feature.

The plan would be to also supply pybamview with a VCF, and then it would annotate SNPs/small indels in a bar above the reference sequence. You could then click on these to get more info about them.