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mhammell-laboratory / TElocal

A package for quantifying transposable elements at a locus level for RNAseq datasets.
GNU General Public License v3.0
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Long read data #52

Open franci-r opened 3 months ago

franci-r commented 3 months ago

Does TElocal work with long read bulk RNA-seq? If so, has anyone done this, and, are there any reccomrecommendations on how to run it?

Thank you, FR

olivertam commented 3 months ago

Hi,

TElocal does not work with long-read at this point. We hope to develop something that would in the near future.

Thanks.