mhammell-laboratory / TEtranscripts

A package for including transposable elements in differential enrichment analysis of sequencing datasets.
http://hammelllab.labsites.cshl.edu/software/#TEtranscripts
GNU General Public License v3.0
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TEtranscripts error after install #128

Closed Anna-xu408 closed 1 year ago

Anna-xu408 commented 1 year ago

Hi:

Thank you for wonderful tool.

After $ python set.py install

then $ TEtranscripts -h it has an error:

Traceback (most recent call last):
  File "/home/bio/miniconda3/envs/TEtranscripts2.7/bin/TEtranscripts", line 4, in <module>
    __import__('pkg_resources').run_script('TEtranscripts==2.2.3', 'TEtranscripts')
  File "/home/bio/miniconda3/envs/TEtranscripts2.7/lib/python2.7/site-packages/pkg_resources/__init__.py", line 666, in run_script
    self.require(requires)[0].run_script(script_name, ns)
  File "/home/bio/miniconda3/envs/TEtranscripts2.7/lib/python2.7/site-packages/pkg_resources/__init__.py", line 1453, in run_script
    .format(**locals()),
pkg_resources.ResolutionError: Script 'scripts/TEtranscripts' not found in metadata at '/home/bio/soft/TEtranscripts/TEtranscripts.egg-info'

So, how to solve it? I need your help

Thank you, Anna

olivertam commented 1 year ago

Hi Anna,

One quick thing to check: Are you typing TEtranscripts -h in the same folder where you installed the software (i.e. in the folder with the python install script)? If so, please move to another folder and try typing TEtranscripts -h. It might be confused as to which TEtranscripts you're trying to access. If that doesn't work, I'll be happy to troubleshoot further.

Thanks.

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