search

mhardcastle / ddf-pipeline

LOFAR pipeline using killms/ddfacet
GNU General Public License v2.0
24 stars 20 forks source link

ms2dynspec doesnt know what BeamModel and BeamNBand are #151

Closed botteon closed 5 years ago

botteon commented 5 years ago

hi, we have this error in Bologna;

Running: ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2
. --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel
 LOFAR --BeamNBand 1 --srclist brightlist.csv
 - 12:36:43 - AsyncProcessPool          | Fixing parent process to vthread 0
 - 12:36:43 - AsyncProcessPool          | Worker affinities not specified, leaving unset
usage: ms2dynspec.py [-h] [--ms MS] [--data DATA] [--model MODEL]
                     [--sols SOLS] [--srclist SRCLIST] [--rad RAD]
                     [--noff NOFF] [--LogBoring LOGBORING] [--imageI IMAGEI]
                     [--imageV IMAGEV] [--BaseDirSpecs BASEDIRSPECS] [--uv UV]
                     [--SolsDir SOLSDIR] [--NCPU NCPU]
ms2dynspec.py: error: unrecognized arguments: --BeamModel LOFAR --BeamNBand 1
 ______             _____                ___  ___ _____
 |  _  \           /  ___|               |  \/  |/  ___|
 | | | |_   _ _ __ \ `--. _ __   ___  ___| .  . |\ `--.
 | | | | | | | '_ \ `--. \ '_ \ / _ \/ __| |\/| | `--. \
 | |/ /| |_| | | | /\__/ / |_) |  __/ (__| |  | |/\__/ /
 |___/  \__, |_| |_\____/| .__/ \___|\___\_|  |_/\____/
         __/ |           | |
        |___/            |_|
                                 version v1.0-5-g673c0b6
 - 12:36:44 - ClearSHM                  | Clear shared memory
 - 12:36:44 - Multiprocessing           | reaping 1 shared memory objects associated with 1 dead DDFacet processes
 - 12:36:44 - ClearSHM                  | Clear Semaphores
 - 12:36:44 - ClearSHM                  | Clear shared dictionaries
FAILED to run ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2. --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv: return value is 2
Traceback (most recent call last):
  File "/opt/ddf-pipeline/scripts/pipeline.py", line 1760, in <module>
    main(o)
  File "/opt/ddf-pipeline/scripts/pipeline.py", line 1724, in main
    run(runcommand,dryrun=o['dryrun'],log=logfilename('ms2dynspec.log'),quiet=o['quiet'])
  File "/opt/ddf-pipeline/utils/auxcodes.py", line 54, in run
    die('FAILED to run '+s+': return value is '+str(retval))
  File "/opt/ddf-pipeline/utils/auxcodes.py", line 36, in die
    raise Exception(s)
Exception: FAILED to run ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2. --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv: return value is 2

we are using dynspec PlotVStokes branch

cyriltasse commented 5 years ago

You have to use the newer version of DynSpecMS...

Le mercredi 30 janvier 2019 à 13:09:15 UTC+1, botteon <notifications@github.com> a écrit :

hi, we have this error in Bologna;

`Running: ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2 . --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv

| \ / | | / |/ | | | | | _ \ --. _ _ | . . |\ --. | | | | | | | ' \ --. \ ' \ / _ \/ _| |\/| | --. | |/ /| || | | | // / |) | / (| | | |// / |/ , || |/| ./ || |/__/ / | | | |/ || version v1.0-5-g673c0b6

we are using dynspec PlotVStokes branch

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.

botteon commented 5 years ago

So we just git pull and keep the same branch?

Il giorno 30 gen 2019, 13:11, alle ore 13:11, cyriltasse notifications@github.com ha scritto:

You have to use the newer version of DynSpecMS...

Le mercredi 30 janvier 2019 à 13:09:15 UTC+1, botteon notifications@github.com a écrit :

hi, we have this error in Bologna;

`Running: ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2 . --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv

  • 12:36:43 - AsyncProcessPool | Fixing parent process to vthread 0
    • 12:36:43 - AsyncProcessPool | Worker affinities not specified, leaving unset
      usage: ms2dynspec.py [-h] [--ms MS] [--data DATA] [--model MODEL]
      [--sols SOLS] [--srclist SRCLIST] [--rad RAD]
      [--noff NOFF] [--LogBoring LOGBORING] [--imageI IMAGEI]
      [--imageV IMAGEV] [--BaseDirSpecs BASEDIRSPECS] [--uv UV]
      [--SolsDir SOLSDIR] [--NCPU NCPU]
      ms2dynspec.py: error: unrecognized arguments: --BeamModel LOFAR --BeamNBand 1

| \ / | | / |/ | | | | | _ \ --. _ _ | . . |\ --. | | | | | | | ' \ --. \ ' \ / _ \/ _| |\/| | --. | |/ /| || | | | // / |) | / (| | | |// / |/ , || |/| ./ || |/__/ / | | | |/ || version v1.0-5-g673c0b6

  • 12:36:44 - ClearSHM | Clear shared memory
    • 12:36:44 - Multiprocessing | reaping 1 shared memory objects associated with 1 dead DDFacet processes
  • 12:36:44 - ClearSHM | Clear Semaphores
  • 12:36:44 - ClearSHM | Clear shared dictionaries
    FAILED to run ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2. --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv: return value is 2
    Traceback (most recent call last):
    File "/opt/ddf-pipeline/scripts/pipeline.py", line 1760, in
    main(o)
    File "/opt/ddf-pipeline/scripts/pipeline.py", line 1724, in main
    run(runcommand,dryrun=o['dryrun'],log=logfilename('ms2dynspec.log'),quiet=o['quiet'])

File "/opt/ddf-pipeline/utils/auxcodes.py", line 54, in run
die('FAILED to run '+s+': return value is '+str(retval))
File "/opt/ddf-pipeline/utils/auxcodes.py", line 36, in die
raise Exception(s)
Exception: FAILED to run ms2dynspec.py --ms mslist-L602890.txt --data DATA_DI_CORRECTED --model DD_PREDICT --sols [DDS3_full_smoothed,DDS3_full_slow_merged] --rad 2. --imageI image_full_ampphase_di_m.NS.int.restored.fits --imageV image_full_low_stokesV.dirty.corr.fits --LogBoring 0 --SolsDir SOLSDIR --BeamModel LOFAR --BeamNBand 1 --srclist brightlist.csv: return value is 2
`

we are using dynspec PlotVStokes branch

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub, or mute the thread.

-- You are receiving this because you authored the thread. Reply to this email directly or view it on GitHub: https://github.com/mhardcastle/ddf-pipeline/issues/151#issuecomment-458922133

cyriltasse commented 5 years ago

It's with the ApplyBeam branch...

botteon commented 5 years ago

Ok thanks, we will do it