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mhlabCodingTeam / SegEM

Semi automated image analysis toolkit for Connectomics
http://segem.io
MIT License
11 stars 3 forks source link

autoKLEE_colormap.mat how to generate? #14

Open yates9 opened 9 years ago

yates9 commented 9 years ago

On other platforms not PCWIN64 this file would have to be re-generated.. Just checking it could be.. o /cortex/segmentation/visualization/autoKLEE_colormap.mat

manuel-berning commented 9 years ago

I do not understand the comment about PCWIN64, the file was the colormap generated by Sarah or Moritz(?) I guess and used for AutoKLEE. Should not be used in may cases (if at all). Did you get any errors concerning this file missing?

yates9 commented 9 years ago

Just it won't run on osx or other architectures.. I was just wondering how it is created.. maybe delete and indicate from where.. not sure.. its minor

manuel-berning commented 9 years ago

I still do not fully understand. The file is just a colormap (e.g. array of RGB values in a matlab save file). Can be open by drag and drop in Matlab. So I am not sure how it should 'run'. Maybe just a misunderstanding?

yates9 commented 9 years ago

Sorry not RUN, but in Matlab the mat files are architecture specific... so on a 32bit its a different mat file, on my mac its different, on a linux box or other supercomputer again.

So the issue is just if someone tries (assuming they need to use it) on a different machine they will be surprised and puzzled..

manuel-berning commented 9 years ago

Weird/Interesting. I was not aware of this issue. I have always copied between win and Linux without problems but I guess just on 64bit